Project Overview

P_SRP002163_2

Host genetic variation and its microbiome interactions within the Human Microbiome Project

Visibility: Public
Publication: Host genetic variation and its microbiome interactions within the Human Microbiome Project Link
 Journal: Genome_Medicine
Source: NA
Sample Number: 2680

Samples in this project
  

SampleID Type Habitat Year Sequence type MNS1 MAS2
S_SRP002163.SRR060370 Gut Gut 2010 WGS - -
S_SRP002163.SRR060371 Gut Gut 2010 WGS - -
S_SRP002163.SRR061903 Gut Gut 2010 WGS - -
S_SRP002163.SRR061904 Gut Gut 2010 WGS - -
S_SRP002163.SRR062103 Gut Gut 2010 WGS - -
S_SRP002163.SRR060398 Nose Nose 2010 WGS - -
S_SRP002163.SRR060399 Nose Nose 2010 WGS - -
S_SRP002163.SRR059320 Urogenital Vagina 2010 WGS - -
S_SRP002163.SRR059321 Urogenital Vagina 2010 WGS - -
S_SRP002163.SRR062045 Urogenital Vagina 2010 WGS - -
S_SRP002163.SRR062046 Urogenital Vagina 2010 WGS - -
S_SRP002163.SRR062096 Urogenital Vagina 2010 WGS - -
S_SRP002163.SRR062097 Urogenital Vagina 2010 WGS - -
S_SRP002163.SRR061907 Nose Nose 2010 WGS - -
S_SRP002163.SRR061908 Nose Nose 2010 WGS - -
S_SRP002163.SRR060442 Gut Gut 2010 WGS - -
S_SRP002163.SRR060443 Gut Gut 2010 WGS - -
S_SRP002163.SRR059855 Gut Gut 2010 WGS - -
S_SRP002163.SRR060412 Urogenital Vagina 2010 WGS - -
S_SRP002163.SRR060413 Urogenital Vagina 2010 WGS - -

1MNS (Microbiome Novelty Score): < 0.12: Non-novel; 0.12-0.2: Novel; > 0.2: Very novel; -: NA for samples before 2010

2MAS (Microbiome Attention Score): < 10: Low-attention; ≥ 10: High-attention; -: NA for samples before 2010