Antibiotics in Feed Induce Prophages in Swine Fecal Microbiomes

Visibility: Public
Publication: Antibiotics in Feed Induce Prophages in Swine Fecal Microbiomes Link
Journal: mBio
Source: NA
Sample Number: 175

Samples in this project
  

SampleID Type Habitat Year Sequence type MNS1 MAS2
S_SRP008126.SRR926450 Mammal_animal Pig 2010 WGS - -
S_SRP008126.SRR926454 Mammal_animal Pig 2010 WGS - -
S_SRP008126.SRR926455 Mammal_animal Pig 2010 WGS - -
S_SRP008126.SRR926458 Mammal_animal Pig 2010 WGS - -
S_SRP008126.SRR926460 Mammal_animal Pig 2010 WGS - -
S_SRP008126.SRR926466 Mammal_animal Pig 2010 WGS - -
S_SRP008126.SRR926469 Mammal_animal Pig 2010 WGS - -
S_SRP008126.SRR926477 Mammal_animal Pig 2010 WGS - -
S_SRP008126.SRR926478 Mammal_animal Pig 2010 WGS - -
S_SRP008126.SRR926482 Mammal_animal Pig 2010 WGS - -
S_SRP008126.SRR926483 Mammal_animal Pig 2010 WGS - -
S_SRP008126.SRR926485 Mammal_animal Pig 2010 WGS - -
S_SRP008126.SRR926486 Mammal_animal Pig 2010 WGS - -
S_SRP008126.SRR926487 Mammal_animal Pig 2010 WGS - -
S_SRP008126.SRR926490 Mammal_animal Pig 2010 WGS - -
S_SRP008126.SRR357665 Mammal_animal Pig 2011 16S V1-V3 - -
S_SRP008126.SRR358627 Mammal_animal Pig 2011 16S V1-V3 - -
S_SRP008126.SRR358628 Mammal_animal Pig 2011 16S V1-V3 - -
S_SRP008126.SRR358629 Mammal_animal Pig 2011 16S V1-V3 - -
S_SRP008126.SRR358646 Mammal_animal Pig 2011 16S V1-V3 - -

1MNS (Microbiome Novelty Score): < 0.12: Non-novel; 0.12-0.2: Novel; > 0.2: Very novel; -: NA for samples before 2010

2MAS (Microbiome Attention Score): < 10: Low-attention; ≥ 10: High-attention; -: NA for samples before 2010