Project Overview

P_SRP033403

Antibiotic-induced shifts in the mouse gut microbiome and metabolome increase susceptibility to Clostridium difficile infection

Visibility: Public
Publication: Antibiotic-induced shifts in the mouse gut microbiome and metabolome increase susceptibility to Clostridium difficile infection Link
 Journal: Nature Communications
Source: Link to the source page
Sample Number: 29

Samples in this project
  

SampleID Type Habitat Year Sequence type MNS1 MAS2
S_SRP033403.SRR1041447 Mammal_animal Mouse 2014 16S V3-V5 0.09002 29.07770
S_SRP033403.SRR1047877 Mammal_animal Mouse 2014 16S V3-V5 0.07577 20.86630
S_SRP033403.SRR1047879 Mammal_animal Mouse 2014 16S V3-V5 0.12844 0.00000
S_SRP033403.SRR1047881 Mammal_animal Mouse 2014 16S V3-V5 0.07561 21.85350
S_SRP033403.SRR1047882 Mammal_animal Mouse 2014 16S V3-V5 0.07494 21.86720
S_SRP033403.SRR1047883 Mammal_animal Mouse 2014 16S V3-V5 0.11396 0.87806
S_SRP033403.SRR1047884 Mammal_animal Mouse 2014 16S V3-V5 0.08809 7.34760
S_SRP033403.SRR1047885 Mammal_animal Mouse 2014 16S V3-V5 0.11388 1.82447
S_SRP033403.SRR1047886 Mammal_animal Mouse 2014 16S V3-V5 0.11702 0.89384
S_SRP033403.SRR1047887 Mammal_animal Mouse 2014 16S V3-V5 0.11682 0.90937
S_SRP033403.SRR1047888 Mammal_animal Mouse 2014 16S V3-V5 0.12061 3.58472
S_SRP033403.SRR1047889 Mammal_animal Mouse 2014 16S V3-V5 0.11016 2.69886
S_SRP033403.SRR1047890 Mammal_animal Mouse 2014 16S V3-V5 0.11275 1.80018
S_SRP033403.SRR1047891 Mammal_animal Mouse 2014 16S V3-V5 0.11218 4.49733
S_SRP033403.SRR1047892 Mammal_animal Mouse 2014 16S V3-V5 0.08107 17.39150
S_SRP033403.SRR1047893 Mammal_animal Mouse 2014 16S V3-V5 0.08821 7.30606
S_SRP033403.SRR1047894 Mammal_animal Mouse 2014 16S V3-V5 0.08692 14.58610
S_SRP033403.SRR1047895 Mammal_animal Mouse 2014 16S V3-V5 0.10541 2.70432
S_SRP033403.SRR1047896 Mammal_animal Mouse 2014 16S V3-V5 0.09038 1.81500
S_SRP033403.SRR1047897 Mammal_animal Mouse 2014 16S V3-V5 0.09976 2.68989

1MNS (Microbiome Novelty Score): < 0.12: Non-novel; 0.12-0.2: Novel; > 0.2: Very novel; -: NA for samples before 2010

2MAS (Microbiome Attention Score): < 10: Low-attention; ≥ 10: High-attention; -: NA for samples before 2010