Temporal Resistome and Microbial Community Dynamics in an Intensive Aquaculture Facility with Prophylactic Antimicrobial Treatment

Visibility: Public
Publication: Temporal Resistome and Microbial Community Dynamics in an Intensive Aquaculture Facility with Prophylactic Antimicrobial Treatment Link
Journal: Microorganisms
Source: NA
Sample Number: 43

Samples in this project
  

SampleID Type Habitat Year Sequence type MNS1 MAS2
S_SRP101485.SRR5318161 Freshwater Water_column_biome 2016 WGS - -
S_SRP101485.SRR5318162 Freshwater Water_column_biome 2015 WGS - -
S_SRP101485.SRR5318163 Freshwater Water_column_biome 2015 WGS - -
S_SRP101485.SRR5318164 Freshwater Water_column_biome 2015 WGS - -
S_SRP101485.SRR5318165 Freshwater Water_column_biome 2016 16S V3-V4 - -
S_SRP101485.SRR5318166 Freshwater Water_column_biome 2016 16S V3-V4 - -
S_SRP101485.SRR5318167 Freshwater Water_column_biome 2016 16S V3-V4 - -
S_SRP101485.SRR5318168 Freshwater Water_column_biome 2016 16S V3-V4 - -
S_SRP101485.SRR5318169 Freshwater Water_column_biome 2016 16S V3-V4 - -
S_SRP101485.SRR5318170 Freshwater Water_column_biome 2016 16S V3-V4 - -
S_SRP101485.SRR5318171 Freshwater Water_column_biome 2016 16S V3-V4 - -
S_SRP101485.SRR5318172 Freshwater Water_column_biome 2016 16S V3-V4 - -
S_SRP101485.SRR5318173 Freshwater Water_column_biome 2016 16S V3-V4 - -
S_SRP101485.SRR5318174 Freshwater Water_column_biome 2015 16S V3-V4 - -
S_SRP101485.SRR5318175 Freshwater Water_column_biome 2015 16S V3-V4 - -
S_SRP101485.SRR5318176 Freshwater Water_column_biome 2015 16S V3-V4 - -
S_SRP101485.SRR5318178 Freshwater Water_column_biome 2015 16S V3-V4 - -
S_SRP101485.SRR5318179 Freshwater Water_column_biome 2015 16S V3-V4 - -
S_SRP101485.SRR5318180 Freshwater Water_column_biome 2015 16S V3-V4 - -
S_SRP101485.SRR5318182 Freshwater Water_column_biome 2015 16S V3-V4 - -

1MNS (Microbiome Novelty Score): < 0.12: Non-novel; 0.12-0.2: Novel; > 0.2: Very novel; -: NA for samples before 2010

2MAS (Microbiome Attention Score): < 10: Low-attention; ≥ 10: High-attention; -: NA for samples before 2010