Project Overview

P_SRP109017

Evaluation of gastric microbiome and metagenomic function in patients with intestinal metaplasia using 16S rRNA gene sequencing

Visibility: Public
Publication: Evaluation of gastric microbiome and metagenomic function in patients with intestinal metaplasia using 16S rRNA gene sequencing Link
 Journal: Helicobacter
Source: NA
Sample Number: 97

Samples in this project
  

SampleID Type Habitat Year Sequence type MNS1 MAS2
S_SRP109017.SRR5675875 Other_humanbodysite Stomach 2016 16S V3-V4 - -
S_SRP109017.SRR5675874 Other_humanbodysite Stomach 2016 16S V3-V4 - -
S_SRP109017.SRR5675872 Other_humanbodysite Stomach 2016 16S V3-V4 - -
S_SRP109017.SRR5675871 Other_humanbodysite Stomach 2016 16S V3-V4 - -
S_SRP109017.SRR5675873 Other_humanbodysite Stomach 2016 16S V3-V4 - -
S_SRP109017.SRR5675870 Other_humanbodysite Stomach 2016 16S V3-V4 - -
S_SRP109017.SRR5675869 Other_humanbodysite Stomach 2016 16S V3-V4 - -
S_SRP109017.SRR5675867 Other_humanbodysite Stomach 2016 16S V3-V4 - -
S_SRP109017.SRR5675868 Other_humanbodysite Stomach 2016 16S V3-V4 - -
S_SRP109017.SRR5675866 Other_humanbodysite Stomach 2016 16S V3-V4 - -
S_SRP109017.SRR5675865 Other_humanbodysite Stomach 2016 16S V3-V4 - -
S_SRP109017.SRR5675864 Other_humanbodysite Stomach 2016 16S V3-V4 - -
S_SRP109017.SRR5675863 Other_humanbodysite Stomach 2016 16S V3-V4 - -
S_SRP109017.SRR5675862 Other_humanbodysite Stomach 2016 16S V3-V4 - -
S_SRP109017.SRR5675861 Other_humanbodysite Stomach 2016 16S V3-V4 - -
S_SRP109017.SRR5675860 Other_humanbodysite Stomach 2016 16S V3-V4 - -
S_SRP109017.SRR5675859 Other_humanbodysite Stomach 2016 16S V3-V4 - -
S_SRP109017.SRR5675858 Other_humanbodysite Stomach 2016 16S V3-V4 - -
S_SRP109017.SRR5675857 Other_humanbodysite Stomach 2016 16S V3-V4 - -
S_SRP109017.SRR5675856 Other_humanbodysite Stomach 2016 16S V3-V4 - -

1MNS (Microbiome Novelty Score): < 0.12: Non-novel; 0.12-0.2: Novel; > 0.2: Very novel; -: NA for samples before 2010

2MAS (Microbiome Attention Score): < 10: Low-attention; ≥ 10: High-attention; -: NA for samples before 2010