Project Overview

P_SRP002163_2

Host genetic variation and its microbiome interactions within the Human Microbiome Project

Visibility: Public
Publication: Host genetic variation and its microbiome interactions within the Human Microbiome Project Link
 Journal: Genome_Medicine
Source: NA
Sample Number: 2680

Samples in this project
  

SampleID Type Habitat Year Sequence type MNS1 MAS2
S_SRP002163.SRR061168 Gut Gut 2010 WGS - -
S_SRP002163.SRR061170 Gut Gut 2010 WGS - -
S_SRP002163.SRR060410 Gut Gut 2010 WGS - -
S_SRP002163.SRR060411 Gut Gut 2010 WGS - -
S_SRP002163.SRR060392 Urogenital Vagina 2010 WGS - -
S_SRP002163.SRR060393 Urogenital Vagina 2010 WGS - -
S_SRP002163.SRR062072 Urogenital Vagina 2010 WGS - -
S_SRP002163.SRR062073 Urogenital Vagina 2010 WGS - -
S_SRP002163.SRR060402 Nose Nose 2010 WGS - -
S_SRP002163.SRR060403 Nose Nose 2010 WGS - -
S_SRP002163.SRR061166 Gut Gut 2010 WGS - -
S_SRP002163.SRR062426 Gut Gut 2010 WGS - -
S_SRP002163.SRR062428 Gut Gut 2010 WGS - -
S_SRP002163.SRR346703 Gut Gut 2011 WGS - -
S_SRP002163.SRR061153 Gut Gut 2010 WGS - -
S_SRP002163.SRR061173 Gut Gut 2010 WGS - -
S_SRP002163.SRR062483 Urogenital Vagina 2010 WGS - -
S_SRP002163.SRR061144 Gut Gut 2010 WGS - -
S_SRP002163.SRR061145 Gut Gut 2010 WGS - -
S_SRP002163.SRR059412 Gut Gut 2010 WGS - -

1MNS (Microbiome Novelty Score): < 0.12: Non-novel; 0.12-0.2: Novel; > 0.2: Very novel; -: NA for samples before 2010

2MAS (Microbiome Attention Score): < 10: Low-attention; ≥ 10: High-attention; -: NA for samples before 2010