Project Overview

P_SRP002163_2

Host genetic variation and its microbiome interactions within the Human Microbiome Project

Visibility: Public
Publication: Host genetic variation and its microbiome interactions within the Human Microbiome Project Link
 Journal: Genome_Medicine
Source: NA
Sample Number: 2680

Samples in this project
  

SampleID Type Habitat Year Sequence type MNS1 MAS2
S_SRP002163.SRR1031709 Gut Gut 2013 WGS - -
S_SRP002163.SRR1031196 Nose Nose 2013 WGS - -
S_SRP002163.SRR1031202 Nose Nose 2013 WGS - -
S_SRP002163.SRR1031454 Nose Nose 2013 WGS - -
S_SRP002163.SRR1031489 Nose Nose 2013 WGS - -
S_SRP002163.SRR1031494 Nose Nose 2013 WGS - -
S_SRP002163.SRR1031153 Urogenital Vagina 2013 WGS - -
S_SRP002163.SRR1031585 Urogenital Vagina 2013 WGS - -
S_SRP002163.SRR1031700 Urogenital Vagina 2013 WGS - -
S_SRP002163.SRR1031817 Urogenital Vagina 2013 WGS - -
S_SRP002163.SRR1804864 Gut Gut 2015 WGS - -
S_SRP002163.SRR1031076 Gut Gut 2013 WGS - -
S_SRP002163.SRR1031462 Gut Gut 2013 WGS - -
S_SRP002163.SRR1031550 Gut Gut 2013 WGS - -
S_SRP002163.SRR1031731 Gut Gut 2013 WGS - -
S_SRP002163.SRR1031069 Nose Nose 2013 WGS - -
S_SRP002163.SRR1031849 Nose Nose 2013 WGS - -
S_SRP002163.SRR1031465 Urogenital Vagina 2013 WGS - -
S_SRP002163.SRR1031617 Urogenital Vagina 2013 WGS - -
S_SRP002163.SRR1031650 Urogenital Vagina 2013 WGS - -

1MNS (Microbiome Novelty Score): < 0.12: Non-novel; 0.12-0.2: Novel; > 0.2: Very novel; -: NA for samples before 2010

2MAS (Microbiome Attention Score): < 10: Low-attention; ≥ 10: High-attention; -: NA for samples before 2010