Project Overview

P_SRP109017

Evaluation of gastric microbiome and metagenomic function in patients with intestinal metaplasia using 16S rRNA gene sequencing

Visibility: Public
Publication: Evaluation of gastric microbiome and metagenomic function in patients with intestinal metaplasia using 16S rRNA gene sequencing Link
 Journal: Helicobacter
Source: NA
Sample Number: 97

Samples in this project
  

SampleID Type Habitat Year Sequence type MNS1 MAS2
S_SRP109017.SRR5675795 Other_humanbodysite Stomach 2016 16S V3-V4 - -
S_SRP109017.SRR5675794 Other_humanbodysite Stomach 2016 16S V3-V4 - -
S_SRP109017.SRR5675793 Other_humanbodysite Stomach 2016 16S V3-V4 - -
S_SRP109017.SRR5675792 Other_humanbodysite Stomach 2016 16S V3-V4 - -
S_SRP109017.SRR5675791 Other_humanbodysite Stomach 2016 16S V3-V4 - -
S_SRP109017.SRR5675789 Other_humanbodysite Stomach 2016 16S V3-V4 - -
S_SRP109017.SRR5675790 Other_humanbodysite Stomach 2016 16S V3-V4 - -
S_SRP109017.SRR5675788 Other_humanbodysite Stomach 2016 16S V3-V4 - -
S_SRP109017.SRR5675787 Other_humanbodysite Stomach 2016 16S V3-V4 - -
S_SRP109017.SRR5675786 Other_humanbodysite Stomach 2016 16S V3-V4 - -
S_SRP109017.SRR5675785 Other_humanbodysite Stomach 2016 16S V3-V4 - -
S_SRP109017.SRR5675784 Other_humanbodysite Stomach 2016 16S V3-V4 - -
S_SRP109017.SRR5675783 Other_humanbodysite Stomach 2016 16S V3-V4 - -
S_SRP109017.SRR5675782 Other_humanbodysite Stomach 2016 16S V3-V4 - -
S_SRP109017.SRR5675781 Other_humanbodysite Stomach 2016 16S V3-V4 - -
S_SRP109017.SRR5675779 Other_humanbodysite Stomach 2016 16S V3-V4 - -
S_SRP109017.SRR5675780 Other_humanbodysite Stomach 2016 16S V3-V4 - -

1MNS (Microbiome Novelty Score): < 0.12: Non-novel; 0.12-0.2: Novel; > 0.2: Very novel; -: NA for samples before 2010

2MAS (Microbiome Attention Score): < 10: Low-attention; ≥ 10: High-attention; -: NA for samples before 2010